Nebraska Payroll Tax Registration

Jun 18, 2025

If you are an employer in Nebraska who has recently hired an employee, you will need to register for payroll taxes with the Nebraska Department of Revenue. This registration process ensures that you are compliant with state tax laws and able to properly withhold and remit taxes on behalf of your employees.

How Nebraska Payroll Registration Works

There are 2 payroll tax setup tasks you may need to complete in Nebraska to get your new hire on payroll for the first time. You can follow the guide below to help you get registered directly with the Nebraska agencies or use Mosey to do it.

Nebraska Withholding Tax Setup for LLP, LLC, Corporation

Businesses with employees in Nebraska must register for a withholding account with the Department of Labor prior to withholding state income tax. Note: When registering a new business for Income Tax Withholding, you can also register for Sales Tax and Business Income Tax at the same time. Adding these accounts later will require filing a paper application (Form 20).

  1. Register for Withholding Tax

    Register online with NebFile for a Nebraska Withholding Tax ID Number and PIN. If you already registered your business with NebFile and did not add a business income tax account at that time, you must mail or fax the application (Form 20) to the Nebraska Department of Revenue. Make note of the ID and PIN shown on the final page, or mailed after a paper application (along with any other IDs and PINs if you added other account types).

Nebraska Unemployment Insurance Setup for LLP, Corporation, LLC

If you have employees in Nebraska, you are required to register with the Department of Labor for an Unemployment Insurance tax account. Note: 501(c)(3) organizations are required to register if they employ four or more individuals on some part of a day in each of 20 different weeks. During the registration process, 501(c)(3) organizations will have the choice to either pay unemployment contributions on taxable wages each quarter or elect to reimburse the Nebraska Unemployment Fund for benefits paid to current or former employees.

  1. Register with NEworks

    Create an account on NEworks. Note that you will not have immediate access to most account features as information is reviewed prior to activating your account. This typically takes 24-48 business hours after submitting registration. Once this is completed you will receive an initial email granting full access. After a final review you will receive another notification with your official Employer Number and tax rate.

Nebraska's Payroll Registration Agencies

More from the blog

Learn how to keep your business compliant in all 50 states across payroll, HR, Secretary of State, and tax.

New Hire Reporting: What Is It & Employer Requirements 2024

When you’ve finally found the perfect new employee for your business, it’s time to get that person onboarded — and part of the onboarding process is reporting every new hire. Essentially, the government needs some basic information about everyone who joins your team. Here’s what employers need to know about how, when, and why they should be reporting new hires. What Is New Hire Reporting? New hire reporting is the process of reporting basic information about every new hire to the federal government.

Gabrielle Sinacola | Jun 10, 2024

HR to Employee Ratio: How To Make Sure Your Team Is Supported

Most HR professionals juggle recruitment, compliance, benefits, and more, but one key metric often goes unnoticed: the HR-to-employee ratio. It tells you whether your HR team has the capacity to support your workforce effectively or if cracks are forming under the pressure. For businesses operating across multiple states or managing remote teams, the stakes are even higher. A poorly balanced HR-to-employee ratio not only compromises efficiency but also opens the door to compliance risks, dissatisfied employees, and missed opportunities for strategic growth.

Gabrielle Sinacola | Dec 5, 2024

HR Compliance Audits: A Complete Guide

HR compliance is critical for business leaders, HR managers, and finance professionals. While compliance requirements can vary significantly across states and even localities, one tool can help organizations overcome the challenge: HR audits. Let’s dive into what HR audits entail and why they are crucial for managing your business. What Is an HR Audit? An HR audit is like a thorough check-up for your company’s HR department. It examines everything from your HR rules to your workflows, helping you protect your business, set up best practices, and pinpoint places to improve.

Alex Kehayias | Jan 15, 2024

Ready to get started?

Schedule a free consultation to see how Mosey transforms business compliance.